A New Revised DNA Cramp Tool Based Approach of Chopping DNA Repetitive and Non-Repetitive Genome Sequences
In vogue tremendous amount of data generated day by day by the living organism of genetic sequences and its accumulation in database, their size is growing in an exponential manner. Due to excessive storage of DNA sequences in public databases like NCBI, EMBL and DDBJ archival maintenance is tedious task. Transmission of information from one place to another place in network management systems is also a critical task. So To improve the efficiency and to reduce the overhead of the database need of compression arises in database optimization. In this connection different techniques were bloomed, but achieved results are not bountiful. Many classical algorithms are fails to compress genetic sequences due to the “specificity of text “encoded in dna and few of the existing techniques achieved positive results. DNA is repetitive and non repetitive in nature. Our proposed technique DNACRAMP is applicable on repetitive and non repetitive sequences of dna and it yields better compression ratio in terms of bits per bases. This is compared with existing techniques and observed that our one is the optimum technique and compression results are on par with existing techniques.
Keywords: compression; encoding; decoding; bio compress; Huffbit compress;dnabit compress;LSBD compression.
Download Full-Text
ABOUT THE AUTHORS
V.Hari Prasad
I am a pProfessor of CSE in reputed sphoorthy engineering college Nadergul(v) hyderbad Andhra pradesh India
P.V. Kumar
He is working as Professor of CSE osmania university Hyderbad ,India
V.Hari Prasad
I am a pProfessor of CSE in reputed sphoorthy engineering college Nadergul(v) hyderbad Andhra pradesh India
P.V. Kumar
He is working as Professor of CSE osmania university Hyderbad ,India